WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39E4B.12c Sequence Name  Y39E4B.12c
Length (nt)  1875   Chromosome Location  III: 13188136-13188243
Chromosome . Primary Identifier  III Chromosome Location . Start  13188136
Chromosome Location . End  13188243
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.12c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28120 GLY-5, isoform c 71.1 624 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056237
WBRNAi00027752

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y39E4B.12c 13188136 13188243 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001630 gly-5 Y39E4B.12 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y39E4B.12c 13188136 13188243 1
CDS:Y39E4B.12c 13188299 13188562 1
CDS:Y39E4B.12c 13190128 13190246 1
CDS:Y39E4B.12c 13191292 13191626 1
CDS:Y39E4B.12c 13194529 13194860 1
CDS:Y39E4B.12c 13195993 13196178 1
CDS:Y39E4B.12c 13197610 13197738 1
CDS:Y39E4B.12c 13200916 13201020 1
CDS:Y39E4B.12c 13203866 13203994 1
CDS:Y39E4B.12c 13204286 13204453 1

1 Sequence

Length
1875

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39E4B.12c.1 Y39E4B.12c.1 2408   III: 13187388-13204897
Transcript:Y39E4B.12c.2 Y39E4B.12c.2 2358   III: 13188103-13204903