WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4B.12c.2 Sequence Name  Y39E4B.12c.2
Length (nt)  2358   Chromosome Location  III: 13188103-13204903
Chromosome . Primary Identifier  III Chromosome Location . Start  13188103
Chromosome Location . End  13204903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.12c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001630 gly-5 Y39E4B.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4B.12c Y39E4B.12c 1875   III: 13188136-13188243

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.12c.2 13188103 13204903 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108586   141   III: 13188103-13188243 Caenorhabditis elegans
Exon108596   264   III: 13188299-13188562 Caenorhabditis elegans
Exon108602   119   III: 13190128-13190246 Caenorhabditis elegans
Exon108608   335   III: 13191292-13191626 Caenorhabditis elegans
Exon108614   332   III: 13194529-13194860 Caenorhabditis elegans
Exon108620   186   III: 13195993-13196178 Caenorhabditis elegans
Exon108626   129   III: 13197610-13197738 Caenorhabditis elegans
Exon108630   105   III: 13200916-13201020 Caenorhabditis elegans
Exon108638   129   III: 13203866-13203994 Caenorhabditis elegans
Exon108644   618   III: 13204286-13204903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.12c.2 13188103 13204903 1

1 Sequence

Length
2358

1 Sequence Ontology Term

Identifier Name Description
transcript