WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4B.12c.1 Sequence Name  Y39E4B.12c.1
Length (nt)  2408   Chromosome Location  III: 13187388-13204897
Chromosome . Primary Identifier  III Chromosome Location . Start  13187388
Chromosome Location . End  13204897 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.12c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001630 gly-5 Y39E4B.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4B.12c Y39E4B.12c 1875   III: 13188136-13188243

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.12c.1 13187388 13204897 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108582   63   III: 13187388-13187450 Caenorhabditis elegans
Exon108590   134   III: 13188110-13188243 Caenorhabditis elegans
Exon108595   264   III: 13188299-13188562 Caenorhabditis elegans
Exon108601   119   III: 13190128-13190246 Caenorhabditis elegans
Exon108607   335   III: 13191292-13191626 Caenorhabditis elegans
Exon108613   332   III: 13194529-13194860 Caenorhabditis elegans
Exon108619   186   III: 13195993-13196178 Caenorhabditis elegans
Exon108625   129   III: 13197610-13197738 Caenorhabditis elegans
Exon108629   105   III: 13200916-13201020 Caenorhabditis elegans
Exon108637   129   III: 13203866-13203994 Caenorhabditis elegans
Exon108641   612   III: 13204286-13204897 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.12c.1 13187388 13204897 1

1 Sequence

Length
2408

1 Sequence Ontology Term

Identifier Name Description
transcript