WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35B3.5e.1 Sequence Name  F35B3.5e.1
Length (nt)  1794   Chromosome Location  X: 17022269-17025659
Chromosome . Primary Identifier  X Chromosome Location . Start  17022269
Chromosome Location . End  17025659 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35B3.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004121 ptrn-1 F35B3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35B3.5e F35B3.5e 1794   X: 17022269-17022410

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F35B3.5e.1 17022269 17025659 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265203   142   X: 17022269-17022410 Caenorhabditis elegans
Exon265208   77   X: 17022460-17022536 Caenorhabditis elegans
Exon265213   96   X: 17022584-17022679 Caenorhabditis elegans
Exon265218   110   X: 17022985-17023094 Caenorhabditis elegans
Exon265223   397   X: 17023447-17023843 Caenorhabditis elegans
Exon265228   131   X: 17023891-17024021 Caenorhabditis elegans
Exon265233   79   X: 17024072-17024150 Caenorhabditis elegans
Exon265238   189   X: 17024258-17024446 Caenorhabditis elegans
Exon265243   216   X: 17024518-17024733 Caenorhabditis elegans
Exon265246   207   X: 17025131-17025337 Caenorhabditis elegans
Exon265247   150   X: 17025510-17025659 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F35B3.5e.1 17022269 17025659 -1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
transcript