WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35B3.5a.1 Sequence Name  F35B3.5a.1
Length (nt)  3800   Chromosome Location  X: 17021821-17030219
Chromosome . Primary Identifier  X Chromosome Location . Start  17021821
Chromosome Location . End  17030219 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35B3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004121 ptrn-1 F35B3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35B3.5a F35B3.5a 3333   X: 17022269-17022410

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F35B3.5a.1 17021821 17030219 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265201   590   X: 17021821-17022410 Caenorhabditis elegans
Exon265205   77   X: 17022460-17022536 Caenorhabditis elegans
Exon265210   96   X: 17022584-17022679 Caenorhabditis elegans
Exon265215   110   X: 17022985-17023094 Caenorhabditis elegans
Exon265220   397   X: 17023447-17023843 Caenorhabditis elegans
Exon265225   131   X: 17023891-17024021 Caenorhabditis elegans
Exon265230   79   X: 17024072-17024150 Caenorhabditis elegans
Exon265236   189   X: 17024258-17024446 Caenorhabditis elegans
Exon265241   216   X: 17024518-17024733 Caenorhabditis elegans
Exon265244   207   X: 17025131-17025337 Caenorhabditis elegans
Exon265248   176   X: 17025510-17025685 Caenorhabditis elegans
Exon265250   221   X: 17026247-17026467 Caenorhabditis elegans
Exon265253   122   X: 17026632-17026753 Caenorhabditis elegans
Exon265256   281   X: 17027136-17027416 Caenorhabditis elegans
Exon265259   149   X: 17027473-17027621 Caenorhabditis elegans
Exon265262   61   X: 17027674-17027734 Caenorhabditis elegans
Exon265265   221   X: 17027922-17028142 Caenorhabditis elegans
Exon265268   86   X: 17028435-17028520 Caenorhabditis elegans
Exon265271   114   X: 17029034-17029147 Caenorhabditis elegans
Exon265274   102   X: 17029199-17029300 Caenorhabditis elegans
Exon265277   102   X: 17029560-17029661 Caenorhabditis elegans
Exon265282   73   X: 17030147-17030219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F35B3.5a.1 17021821 17030219 -1

1 Sequence

Length
3800

1 Sequence Ontology Term

Identifier Name Description
transcript