WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35B3.5c.1 Sequence Name  F35B3.5c.1
Length (nt)  3788   Chromosome Location  X: 17021820-17030200
Chromosome . Primary Identifier  X Chromosome Location . Start  17021820
Chromosome Location . End  17030200 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35B3.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004121 ptrn-1 F35B3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35B3.5c F35B3.5c 3339   X: 17022269-17022410

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F35B3.5c.1 17021820 17030200 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265200   591   X: 17021820-17022410 Caenorhabditis elegans
Exon265206   77   X: 17022460-17022536 Caenorhabditis elegans
Exon265211   96   X: 17022584-17022679 Caenorhabditis elegans
Exon265216   110   X: 17022985-17023094 Caenorhabditis elegans
Exon265221   397   X: 17023447-17023843 Caenorhabditis elegans
Exon265226   131   X: 17023891-17024021 Caenorhabditis elegans
Exon265231   79   X: 17024072-17024150 Caenorhabditis elegans
Exon265237   189   X: 17024258-17024446 Caenorhabditis elegans
Exon265242   216   X: 17024518-17024733 Caenorhabditis elegans
Exon265245   207   X: 17025131-17025337 Caenorhabditis elegans
Exon265249   176   X: 17025510-17025685 Caenorhabditis elegans
Exon265251   227   X: 17026247-17026473 Caenorhabditis elegans
Exon265254   122   X: 17026632-17026753 Caenorhabditis elegans
Exon265257   281   X: 17027136-17027416 Caenorhabditis elegans
Exon265260   149   X: 17027473-17027621 Caenorhabditis elegans
Exon265263   61   X: 17027674-17027734 Caenorhabditis elegans
Exon265266   221   X: 17027922-17028142 Caenorhabditis elegans
Exon265269   86   X: 17028435-17028520 Caenorhabditis elegans
Exon265272   114   X: 17029034-17029147 Caenorhabditis elegans
Exon265275   102   X: 17029199-17029300 Caenorhabditis elegans
Exon265278   102   X: 17029560-17029661 Caenorhabditis elegans
Exon265280   54   X: 17030147-17030200 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F35B3.5c.1 17021820 17030200 -1

1 Sequence

Length
3788

1 Sequence Ontology Term

Identifier Name Description
transcript