WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E2.2a Sequence Name  F49E2.2a
Length (nt)  1569   Chromosome Location  X: 9569408-9569510
Chromosome . Primary Identifier  X Chromosome Location . Start  9569408
Chromosome Location . End  9569510
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E2.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31527 F49E2.2, isoform a 58.3 522 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047862
WBRNAi00015326
WBRNAi00015327
WBRNAi00032545

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F49E2.2a 9569408 9569510 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009886 F49E2.2 F49E2.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F49E2.2a 9569408 9569510 1
CDS:F49E2.2a 9569551 9569601 1
CDS:F49E2.2a 9570238 9570389 1
CDS:F49E2.2a 9570442 9570680 1
CDS:F49E2.2a 9570764 9570947 1
CDS:F49E2.2a 9570990 9571136 1
CDS:F49E2.2a 9572080 9572247 1
CDS:F49E2.2a 9572319 9572456 1
CDS:F49E2.2a 9572507 9572601 1
CDS:F49E2.2a 9572646 9572838 1
CDS:F49E2.2a 9573347 9573445 1

1 Sequence

Length
1569

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E2.2a.2 F49E2.2a.2 2011   X: 9566729-9573740
Transcript:F49E2.2a.3 F49E2.2a.3 1966   X: 9567022-9573740
Transcript:F49E2.2a.4 F49E2.2a.4 2070   X: 9567252-9573740
Transcript:F49E2.2a.1 F49E2.2a.1 1893   X: 9569379-9573740