WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E2.2a.1 Sequence Name  F49E2.2a.1
Length (nt)  1893   Chromosome Location  X: 9569379-9573740
Chromosome . Primary Identifier  X Chromosome Location . Start  9569379
Chromosome Location . End  9573740 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E2.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009886 F49E2.2 F49E2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E2.2a F49E2.2a 1569   X: 9569408-9569510

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.2a.1 9569379 9573740 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246417   132   X: 9569379-9569510 Caenorhabditis elegans
Exon246418   51   X: 9569551-9569601 Caenorhabditis elegans
Exon246423   152   X: 9570238-9570389 Caenorhabditis elegans
Exon246428   239   X: 9570442-9570680 Caenorhabditis elegans
Exon246433   184   X: 9570764-9570947 Caenorhabditis elegans
Exon246438   147   X: 9570990-9571136 Caenorhabditis elegans
Exon246443   168   X: 9572080-9572247 Caenorhabditis elegans
Exon246448   138   X: 9572319-9572456 Caenorhabditis elegans
Exon246453   95   X: 9572507-9572601 Caenorhabditis elegans
Exon246458   193   X: 9572646-9572838 Caenorhabditis elegans
Exon246464   394   X: 9573347-9573740 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.2a.1 9569379 9573740 1

1 Sequence

Length
1893

1 Sequence Ontology Term

Identifier Name Description
transcript