WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13B9.1a.1 Sequence Name  F13B9.1a.1
Length (nt)  5310   Chromosome Location  X: 8287252-8294519
Chromosome . Primary Identifier  X Chromosome Location . Start  8287252
Chromosome Location . End  8294519 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13B9.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017419 sec-16A.2 F13B9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B9.1a F13B9.1a 4899   X: 8287261-8287495

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F13B9.1a.1 8287252 8294519 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241833   244   X: 8287252-8287495 Caenorhabditis elegans
Exon241838   155   X: 8287563-8287717 Caenorhabditis elegans
Exon241844   393   X: 8287764-8288156 Caenorhabditis elegans
Exon241850   123   X: 8288314-8288436 Caenorhabditis elegans
Exon241854   204   X: 8288601-8288804 Caenorhabditis elegans
Exon241860   179   X: 8288852-8289030 Caenorhabditis elegans
Exon241866   1084   X: 8289076-8290159 Caenorhabditis elegans
Exon241872   107   X: 8290221-8290327 Caenorhabditis elegans
Exon241878   66   X: 8290409-8290474 Caenorhabditis elegans
Exon241879   403   X: 8290712-8291114 Caenorhabditis elegans
Exon241885   327   X: 8291165-8291491 Caenorhabditis elegans
Exon241891   209   X: 8291568-8291776 Caenorhabditis elegans
Exon241897   249   X: 8291824-8292072 Caenorhabditis elegans
Exon241903   291   X: 8292126-8292416 Caenorhabditis elegans
Exon241910   674   X: 8292469-8293142 Caenorhabditis elegans
Exon241920   602   X: 8293918-8294519 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F13B9.1a.1 8287252 8294519 1

1 Sequence

Length
5310

1 Sequence Ontology Term

Identifier Name Description
transcript