WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C47C12.3a Sequence Name  C47C12.3a
Length (nt)  909   Chromosome Location  X: 7745823-7745907
Chromosome . Primary Identifier  X Chromosome Location . Start  7745823
Chromosome Location . End  7745907
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47C12.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33037 REF-2, isoform a 34.9 302 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00042659
WBRNAi00022787
WBRNAi00024840
WBRNAi00027231
WBRNAi00012063
WBRNAi00029900
WBRNAi00101777
WBRNAi00023094
WBRNAi00023170
WBRNAi00023682
WBRNAi00023970
WBRNAi00075917

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C47C12.3a 7745823 7745907 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004335 ref-2 C47C12.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C47C12.3a 7745823 7745907 1
CDS:C47C12.3a 7745958 7746048 1
CDS:C47C12.3a 7746162 7746348 1
CDS:C47C12.3a 7746875 7746998 1
CDS:C47C12.3a 7748166 7748278 1
CDS:C47C12.3a 7748330 7748386 1
CDS:C47C12.3a 7749179 7749430 1

1 Sequence

Length
909

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C47C12.3a.1 C47C12.3a.1 1500   X: 7745815-7750013