WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47C12.3a.1 Sequence Name  C47C12.3a.1
Length (nt)  1500   Chromosome Location  X: 7745815-7750013
Chromosome . Primary Identifier  X Chromosome Location . Start  7745815
Chromosome Location . End  7750013 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47C12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004335 ref-2 C47C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47C12.3a C47C12.3a 909   X: 7745823-7745907

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47C12.3a.1 7745815 7750013 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240412   93   X: 7745815-7745907 Caenorhabditis elegans
Exon240413   91   X: 7745958-7746048 Caenorhabditis elegans
Exon240415   187   X: 7746162-7746348 Caenorhabditis elegans
Exon240417   124   X: 7746875-7746998 Caenorhabditis elegans
Exon240420   113   X: 7748166-7748278 Caenorhabditis elegans
Exon240422   57   X: 7748330-7748386 Caenorhabditis elegans
Exon240425   835   X: 7749179-7750013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47C12.3a.1 7745815 7750013 1

1 Sequence

Length
1500

1 Sequence Ontology Term

Identifier Name Description
transcript