WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C42D8.4a Sequence Name  C42D8.4a
Length (nt)  627   Chromosome Location  X: 5079779-5079844
Chromosome . Primary Identifier  X Chromosome Location . Start  5079779
Chromosome Location . End  5079844
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D8.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04205 ETS-5, isoform a 22.6 208 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042366
WBRNAi00011877
WBRNAi00029753

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C42D8.4a 5079779 5079844 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016600 ets-5 C42D8.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C42D8.4a 5079779 5079844 -1
CDS:C42D8.4a 5079892 5080001 -1
CDS:C42D8.4a 5080054 5080192 -1
CDS:C42D8.4a 5081263 5081335 -1
CDS:C42D8.4a 5081385 5081623 -1

1 Sequence

Length
627

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C42D8.4a.4 C42D8.4a.4 708   X: 5076635-5081623
Transcript:C42D8.4a.3 C42D8.4a.3 1059   X: 5079657-5083431
Transcript:C42D8.4a.2 C42D8.4a.2 2123   X: 5079657-5084430
Transcript:C42D8.4a.1 C42D8.4a.1 900   X: 5079657-5084526