WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42D8.4a.1 Sequence Name  C42D8.4a.1
Length (nt)  900   Chromosome Location  X: 5079657-5084526
Chromosome . Primary Identifier  X Chromosome Location . Start  5079657
Chromosome Location . End  5084526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D8.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016600 ets-5 C42D8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42D8.4a C42D8.4a 627   X: 5079779-5079844

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C42D8.4a.1 5079657 5084526 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232545   188   X: 5079657-5079844 Caenorhabditis elegans
Exon232548   110   X: 5079892-5080001 Caenorhabditis elegans
Exon232553   139   X: 5080054-5080192 Caenorhabditis elegans
Exon232558   73   X: 5081263-5081335 Caenorhabditis elegans
Exon232564   244   X: 5081385-5081628 Caenorhabditis elegans
Exon232568   90   X: 5083062-5083151 Caenorhabditis elegans
Exon232575   56   X: 5084471-5084526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C42D8.4a.1 5079657 5084526 -1

1 Sequence

Length
900

1 Sequence Ontology Term

Identifier Name Description
transcript