WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48D6.2a Sequence Name  F48D6.2a
Length (nt)  1002   Chromosome Location  X: 4252356-4252493
Chromosome . Primary Identifier  X Chromosome Location . Start  4252356
Chromosome Location . End  4252493
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48D6.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07259 SRV-5, isoform a 38.1 333 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047737
WBRNAi00015243
WBRNAi00032481

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F48D6.2a 4252356 4252493 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005716 srv-5 F48D6.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F48D6.2a 4252356 4252493 1
CDS:F48D6.2a 4252591 4252737 1
CDS:F48D6.2a 4252790 4252867 1
CDS:F48D6.2a 4253025 4253180 1
CDS:F48D6.2a 4253230 4253346 1
CDS:F48D6.2a 4253518 4253678 1
CDS:F48D6.2a 4253827 4253934 1
CDS:F48D6.2a 4253989 4254085 1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48D6.2a.1 F48D6.2a.1 1100   X: 4252347-4254174