WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48D6.2a.1 Sequence Name  F48D6.2a.1
Length (nt)  1100   Chromosome Location  X: 4252347-4254174
Chromosome . Primary Identifier  X Chromosome Location . Start  4252347
Chromosome Location . End  4254174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48D6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005716 srv-5 F48D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48D6.2a F48D6.2a 1002   X: 4252356-4252493

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48D6.2a.1 4252347 4254174 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230257   147   X: 4252347-4252493 Caenorhabditis elegans
Exon230259   147   X: 4252591-4252737 Caenorhabditis elegans
Exon230261   78   X: 4252790-4252867 Caenorhabditis elegans
Exon230263   156   X: 4253025-4253180 Caenorhabditis elegans
Exon230265   117   X: 4253230-4253346 Caenorhabditis elegans
Exon230267   161   X: 4253518-4253678 Caenorhabditis elegans
Exon230269   108   X: 4253827-4253934 Caenorhabditis elegans
Exon230272   186   X: 4253989-4254174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48D6.2a.1 4252347 4254174 1

1 Sequence

Length
1100

1 Sequence Ontology Term

Identifier Name Description
transcript