WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07D1.4a Sequence Name  T07D1.4a
Length (nt)  1200   Chromosome Location  X: 2446075-2446208
Chromosome . Primary Identifier  X Chromosome Location . Start  2446075
Chromosome Location . End  2446208
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D1.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51693 FOX-1, isoform a 42.4 399 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052744
WBRNAi00065647
WBRNAi00018356

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:T07D1.4a 2446075 2446208 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001484 fox-1 T07D1.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier 		Start End Strand
CDS:T07D1.4a 2446075 2446208 -1
CDS:T07D1.4a 2446257 2446601 -1
CDS:T07D1.4a 2446647 2446791 -1
CDS:T07D1.4a 2446847 2446983 -1
CDS:T07D1.4a 2447343 2447538 -1
CDS:T07D1.4a 2448762 2448850 -1
CDS:T07D1.4a 2450342 2450495 -1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07D1.4a.2 T07D1.4a.2 2267   X: 2445117-2459893
Transcript:T07D1.4a.4 T07D1.4a.4 2233   X: 2445117-2451808
Transcript:T07D1.4a.3 T07D1.4a.3 2355   X: 2445117-2456056
Transcript:T07D1.4a.1 T07D1.4a.1 1809   X: 2445475-2450504