WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07D1.4a.3 Sequence Name  T07D1.4a.3
Length (nt)  2355   Chromosome Location  X: 2445117-2456056
Chromosome . Primary Identifier  X Chromosome Location . Start  2445117
Chromosome Location . End  2456056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D1.4a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001484 fox-1 T07D1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07D1.4a T07D1.4a 1200   X: 2446075-2446208

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07D1.4a.3 2445117 2456056 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225796   1092   X: 2445117-2446208 Caenorhabditis elegans
Exon225803   345   X: 2446257-2446601 Caenorhabditis elegans
Exon225809   145   X: 2446647-2446791 Caenorhabditis elegans
Exon225815   137   X: 2446847-2446983 Caenorhabditis elegans
Exon225822   196   X: 2447343-2447538 Caenorhabditis elegans
Exon225831   89   X: 2448762-2448850 Caenorhabditis elegans
Exon225836   163   X: 2450342-2450504 Caenorhabditis elegans
Exon225841   188   X: 2455869-2456056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07D1.4a.3 2445117 2456056 -1

1 Sequence

Length
2355

1 Sequence Ontology Term

Identifier Name Description
transcript