WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R186.5a Sequence Name  R186.5a
Length (nt)  1440   Chromosome Location  V: 12973412-12973519
Chromosome . Primary Identifier  V Chromosome Location . Start  12973412
Chromosome Location . End  12973519
Paste the following link
Quick Links:
SummaryProteinsOther
 
Quick Links:
SummaryProteinsOther
 
Lists
This CDS isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R186.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37401 SHW-3, isoform a 54.8 479 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00052014
WBRNAi00017893
WBRNAi00034957
WBRNAi00088617
WBRNAi00088724

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:R186.5a 12973412 12973519 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004793 shw-3 R186.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:R186.5a 12973412 12973519 -1
CDS:R186.5a 12973568 12973672 -1
CDS:R186.5a 12973731 12973847 -1
CDS:R186.5a 12974496 12974900 -1
CDS:R186.5a 12974950 12975270 -1
CDS:R186.5a 12975804 12975932 -1
CDS:R186.5a 12975979 12976039 -1
CDS:R186.5a 12976086 12976190 -1
CDS:R186.5a 12976243 12976331 -1

1 Sequence

Length
1440

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R186.5a.1 R186.5a.1 1679   V: 12973261-12987161
Transcript:R186.5a.2 R186.5a.2 1676   V: 12973261-12980631
Transcript:R186.5a.3 R186.5a.3 1603   V: 12973261-12976343