WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R186.5a.1 Sequence Name  R186.5a.1
Length (nt)  1679   Chromosome Location  V: 12973261-12987161
Chromosome . Primary Identifier  V Chromosome Location . Start  12973261
Chromosome Location . End  12987161 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R186.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004793 shw-3 R186.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R186.5a R186.5a 1440   V: 12973412-12973519

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R186.5a.1 12973261 12987161 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203284   259   V: 12973261-12973519 Caenorhabditis elegans
Exon203288   105   V: 12973568-12973672 Caenorhabditis elegans
Exon203293   117   V: 12973731-12973847 Caenorhabditis elegans
Exon203299   405   V: 12974496-12974900 Caenorhabditis elegans
Exon203304   321   V: 12974950-12975270 Caenorhabditis elegans
Exon203310   129   V: 12975804-12975932 Caenorhabditis elegans
Exon203315   61   V: 12975979-12976039 Caenorhabditis elegans
Exon203320   105   V: 12976086-12976190 Caenorhabditis elegans
Exon203325   99   V: 12976243-12976341 Caenorhabditis elegans
Exon203335   78   V: 12987084-12987161 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R186.5a.1 12973261 12987161 -1

1 Sequence

Length
1679

1 Sequence Ontology Term

Identifier Name Description
transcript