WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07B5.9k Sequence Name  R07B5.9k
Length (nt)  1545   Chromosome Location  V: 9850316-9850387
Chromosome . Primary Identifier  V Chromosome Location . Start  9850316
Chromosome Location . End  9850387
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B5.9k

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48104 LSY-12, isoform k 58.3 514 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00051424
WBRNAi00062990
WBRNAi00062991
WBRNAi00084633
WBRNAi00084637
WBRNAi00117756
WBRNAi00117757

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:R07B5.9k 9850316 9850387 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045419 lsy-12 R07B5.9 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier 		Start End Strand
CDS:R07B5.9k 9850316 9850387 -1
CDS:R07B5.9k 9850430 9850532 -1
CDS:R07B5.9k 9850726 9850825 -1
CDS:R07B5.9k 9850879 9851276 -1
CDS:R07B5.9k 9851803 9852161 -1
CDS:R07B5.9k 9852310 9852501 -1
CDS:R07B5.9k 9852545 9852730 -1
CDS:R07B5.9k 9853371 9853505 -1

1 Sequence

Length
1545

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07B5.9k.2 R07B5.9k.2 4332   V: 9846165-9853748
Transcript:R07B5.9k.3 R07B5.9k.3 2039   V: 9849927-9853745
Transcript:R07B5.9k.1 R07B5.9k.1 2103   V: 9849929-9856345