WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B5.9k.3 Sequence Name  R07B5.9k.3
Length (nt)  2039   Chromosome Location  V: 9849927-9853745
Chromosome . Primary Identifier  V Chromosome Location . Start  9849927
Chromosome Location . End  9853745 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B5.9k.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045419 lsy-12 R07B5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B5.9k R07B5.9k 1545   V: 9850316-9850387

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R07B5.9k.3 9849927 9853745 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193873   461   V: 9849927-9850387 Caenorhabditis elegans
Exon193902   103   V: 9850430-9850532 Caenorhabditis elegans
Exon193917   100   V: 9850726-9850825 Caenorhabditis elegans
Exon193932   398   V: 9850879-9851276 Caenorhabditis elegans
Exon193947   359   V: 9851803-9852161 Caenorhabditis elegans
Exon193962   192   V: 9852310-9852501 Caenorhabditis elegans
Exon193977   186   V: 9852545-9852730 Caenorhabditis elegans
Exon193987   135   V: 9853371-9853505 Caenorhabditis elegans
Exon194000   105   V: 9853641-9853745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R07B5.9k.3 9849927 9853745 -1

1 Sequence

Length
2039

1 Sequence Ontology Term

Identifier Name Description
transcript