WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:VC5.3a Sequence Name  VC5.3a
Length (nt)  4323   Chromosome Location  V: 7075961-7076005
Chromosome . Primary Identifier  V Chromosome Location . Start  7075961
Chromosome Location . End  7076005
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
VC5.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21224 NPA-1, isoform a 164.7 1440 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00054460
WBRNAi00019428
WBRNAi00019430
WBRNAi00062987
WBRNAi00036113
WBRNAi00066153

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:VC5.3a 7075961 7076005 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003786 npa-1 VC5.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:VC5.3a 7075961 7076005 1
CDS:VC5.3a 7076351 7076385 1
CDS:VC5.3a 7076495 7077188 1
CDS:VC5.3a 7077232 7077603 1
CDS:VC5.3a 7077659 7078030 1
CDS:VC5.3a 7078076 7078447 1
CDS:VC5.3a 7078490 7078861 1
CDS:VC5.3a 7078907 7079281 1
CDS:VC5.3a 7079328 7079705 1
CDS:VC5.3a 7079752 7080966 1
CDS:VC5.3a 7081362 7081454 1

1 Sequence

Length
4323

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:VC5.3a.1 VC5.3a.1 4533   V: 7075877-7081580