WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R12A1.2a Sequence Name  R12A1.2a
Length (nt)  1377   Chromosome Location  V: 1393366-1393449
Chromosome . Primary Identifier  V Chromosome Location . Start  1393366
Chromosome Location . End  1393449
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12A1.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29448 SNT-5, isoform a 52.3 458 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00095697
WBRNAi00051825
WBRNAi00017785
WBRNAi00034876
WBRNAi00112398

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:R12A1.2a 1393366 1393449 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004925 snt-5 R12A1.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:R12A1.2a 1393366 1393449 -1
CDS:R12A1.2a 1394615 1394729 -1
CDS:R12A1.2a 1394780 1394951 -1
CDS:R12A1.2a 1394999 1395248 -1
CDS:R12A1.2a 1395718 1395925 -1
CDS:R12A1.2a 1395983 1396101 -1
CDS:R12A1.2a 1397130 1397235 -1
CDS:R12A1.2a 1402642 1402765 -1
CDS:R12A1.2a 1406862 1406930 -1
CDS:R12A1.2a 1411430 1411559 -1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R12A1.2a.1 R12A1.2a.1 1631   V: 1393112-1411559