WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12A1.2a.1 Sequence Name  R12A1.2a.1
Length (nt)  1631   Chromosome Location  V: 1393112-1411559
Chromosome . Primary Identifier  V Chromosome Location . Start  1393112
Chromosome Location . End  1411559 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12A1.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004925 snt-5 R12A1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12A1.2a R12A1.2a 1377   V: 1393366-1393449

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R12A1.2a.1 1393112 1411559 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172134   338   V: 1393112-1393449 Caenorhabditis elegans
Exon172138   115   V: 1394615-1394729 Caenorhabditis elegans
Exon172142   172   V: 1394780-1394951 Caenorhabditis elegans
Exon172146   250   V: 1394999-1395248 Caenorhabditis elegans
Exon172150   208   V: 1395718-1395925 Caenorhabditis elegans
Exon172154   119   V: 1395983-1396101 Caenorhabditis elegans
Exon172158   106   V: 1397130-1397235 Caenorhabditis elegans
Exon172164   124   V: 1402642-1402765 Caenorhabditis elegans
Exon172166   69   V: 1406862-1406930 Caenorhabditis elegans
Exon172169   130   V: 1411430-1411559 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R12A1.2a.1 1393112 1411559 -1

1 Sequence

Length
1631

1 Sequence Ontology Term

Identifier Name Description
transcript