WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F09E8.3b Sequence Name  F09E8.3b
Length (nt)  2772   Chromosome Location  IV: 13158038-13158068
Chromosome . Primary Identifier  IV Chromosome Location . Start  13158038
Chromosome Location . End  13158068
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E8.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49987 MSH-5, isoform b 102.3 923 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00044136
WBRNAi00008131
WBRNAi00012983
WBRNAi00012984
WBRNAi00030712
WBRNAi00001814

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F09E8.3b 13158038 13158068 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003421 msh-5 F09E8.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F09E8.3b 13158038 13158068 1
CDS:F09E8.3b 13158116 13158281 1
CDS:F09E8.3b 13158767 13159553 1
CDS:F09E8.3b 13159629 13159870 1
CDS:F09E8.3b 13160421 13160582 1
CDS:F09E8.3b 13160629 13160883 1
CDS:F09E8.3b 13161658 13161867 1
CDS:F09E8.3b 13161915 13162022 1
CDS:F09E8.3b 13162750 13163238 1
CDS:F09E8.3b 13163627 13163948 1

1 Sequence

Length
2772

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F09E8.3b.1 F09E8.3b.1 2772   IV: 13158038-13163948