WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E8.3b.1 Sequence Name  F09E8.3b.1
Length (nt)  2772   Chromosome Location  IV: 13158038-13163948
Chromosome . Primary Identifier  IV Chromosome Location . Start  13158038
Chromosome Location . End  13163948 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003421 msh-5 F09E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E8.3b F09E8.3b 2772   IV: 13158038-13158068

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F09E8.3b.1 13158038 13163948 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149746   31   IV: 13158038-13158068 Caenorhabditis elegans
Exon149748   166   IV: 13158116-13158281 Caenorhabditis elegans
Exon149750   787   IV: 13158767-13159553 Caenorhabditis elegans
Exon149752   242   IV: 13159629-13159870 Caenorhabditis elegans
Exon149754   162   IV: 13160421-13160582 Caenorhabditis elegans
Exon149756   255   IV: 13160629-13160883 Caenorhabditis elegans
Exon149758   210   IV: 13161658-13161867 Caenorhabditis elegans
Exon149760   108   IV: 13161915-13162022 Caenorhabditis elegans
Exon149762   489   IV: 13162750-13163238 Caenorhabditis elegans
Exon149763   322   IV: 13163627-13163948 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F09E8.3b.1 13158038 13163948 1

1 Sequence

Length
2772

1 Sequence Ontology Term

Identifier Name Description
transcript