WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E6.1c.1 Sequence Name  C29E6.1c.1
Length (nt)  2082   Chromosome Location  IV: 11885618-11890892
Chromosome . Primary Identifier  IV Chromosome Location . Start  11885618
Chromosome Location . End  11890892 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E6.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002827 let-653 C29E6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E6.1c C29E6.1c 2082   IV: 11885618-11885678

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C29E6.1c.1 11885618 11890892 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145752   61   IV: 11885618-11885678 Caenorhabditis elegans
Exon145755   294   IV: 11885730-11886023 Caenorhabditis elegans
Exon145758   279   IV: 11886446-11886724 Caenorhabditis elegans
Exon145761   206   IV: 11886770-11886975 Caenorhabditis elegans
Exon145764   161   IV: 11888424-11888584 Caenorhabditis elegans
Exon145765   120   IV: 11888697-11888816 Caenorhabditis elegans
Exon145769   297   IV: 11889557-11889853 Caenorhabditis elegans
Exon145772   370   IV: 11890084-11890453 Caenorhabditis elegans
Exon145775   184   IV: 11890551-11890734 Caenorhabditis elegans
Exon145776   110   IV: 11890783-11890892 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C29E6.1c.1 11885618 11890892 1

1 Sequence

Length
2082

1 Sequence Ontology Term

Identifier Name Description
transcript