WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y40C5A.4a Sequence Name  Y40C5A.4a
Length (nt)  1224   Chromosome Location  IV: 7349762-7349809
Chromosome . Primary Identifier  IV Chromosome Location . Start  7349762
Chromosome Location . End  7349809
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40C5A.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24258 Y40C5A.4, isoform a 46.8 407 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00000263
WBRNAi00056326
WBRNAi00020445
WBRNAi00036982

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y40C5A.4a 7349762 7349809 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021497 Y40C5A.4 Y40C5A.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y40C5A.4a 7349762 7349809 -1
CDS:Y40C5A.4a 7349895 7350044 -1
CDS:Y40C5A.4a 7350100 7350237 -1
CDS:Y40C5A.4a 7350574 7350688 -1
CDS:Y40C5A.4a 7351408 7351507 -1
CDS:Y40C5A.4a 7351556 7351688 -1
CDS:Y40C5A.4a 7351743 7352006 -1
CDS:Y40C5A.4a 7352179 7352454 -1

1 Sequence

Length
1224

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y40C5A.4a.3 Y40C5A.4a.3 1443   IV: 7349279-7352469
Transcript:Y40C5A.4a.1 Y40C5A.4a.1 2327   IV: 7349279-7365111
Transcript:Y40C5A.4a.2 Y40C5A.4a.2 2605   IV: 7349280-7365111