WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40C5A.4a.1 Sequence Name  Y40C5A.4a.1
Length (nt)  2327   Chromosome Location  IV: 7349279-7365111
Chromosome . Primary Identifier  IV Chromosome Location . Start  7349279
Chromosome Location . End  7365111 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40C5A.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021497 Y40C5A.4 Y40C5A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40C5A.4a Y40C5A.4a 1224   IV: 7349762-7349809

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.4a.1 7349279 7365111 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130354   198   IV: 7349279-7349476 Caenorhabditis elegans
Exon130358   54   IV: 7349756-7349809 Caenorhabditis elegans
Exon130360   150   IV: 7349895-7350044 Caenorhabditis elegans
Exon130366   138   IV: 7350100-7350237 Caenorhabditis elegans
Exon130372   115   IV: 7350574-7350688 Caenorhabditis elegans
Exon130379   100   IV: 7351408-7351507 Caenorhabditis elegans
Exon130385   133   IV: 7351556-7351688 Caenorhabditis elegans
Exon130391   264   IV: 7351743-7352006 Caenorhabditis elegans
Exon130397   284   IV: 7352179-7352462 Caenorhabditis elegans
Exon130405   426   IV: 7363980-7364405 Caenorhabditis elegans
Exon130410   275   IV: 7364598-7364872 Caenorhabditis elegans
Exon130417   190   IV: 7364922-7365111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.4a.1 7349279 7365111 -1

1 Sequence

Length
2327

1 Sequence Ontology Term

Identifier Name Description
transcript