WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R08C7.2a Sequence Name  R08C7.2a
Length (nt)  1047   Chromosome Location  IV: 4447332-4447428
Chromosome . Primary Identifier  IV Chromosome Location . Start  4447332
Chromosome Location . End  4447428
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08C7.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07425 CHAT-1, isoform a 38.6 348 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00107875
WBRNAi00051534
WBRNAi00017578
WBRNAi00034741
WBRNAi00026064
WBRNAi00027435

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:R08C7.2a 4447332 4447428 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019946 chat-1 R08C7.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier 		Start End Strand
CDS:R08C7.2a 4447332 4447428 1
CDS:R08C7.2a 4447719 4448029 1
CDS:R08C7.2a 4448100 4448190 1
CDS:R08C7.2a 4448328 4448473 1
CDS:R08C7.2a 4448640 4448835 1
CDS:R08C7.2a 4449451 4449656 1

1 Sequence

Length
1047

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R08C7.2a.1 R08C7.2a.1 1289   IV: 4447331-4449897