WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08C7.2a.1 Sequence Name  R08C7.2a.1
Length (nt)  1289   Chromosome Location  IV: 4447331-4449897
Chromosome . Primary Identifier  IV Chromosome Location . Start  4447331
Chromosome Location . End  4449897 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08C7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019946 chat-1 R08C7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08C7.2a R08C7.2a 1047   IV: 4447332-4447428

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R08C7.2a.1 4447331 4449897 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119325   98   IV: 4447331-4447428 Caenorhabditis elegans
Exon119329   311   IV: 4447719-4448029 Caenorhabditis elegans
Exon119331   91   IV: 4448100-4448190 Caenorhabditis elegans
Exon119333   146   IV: 4448328-4448473 Caenorhabditis elegans
Exon119336   196   IV: 4448640-4448835 Caenorhabditis elegans
Exon119342   447   IV: 4449451-4449897 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R08C7.2a.1 4447331 4449897 1

1 Sequence

Length
1289

1 Sequence Ontology Term

Identifier Name Description
transcript