WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0546.2a Sequence Name  B0546.2a
Length (nt)  1311   Chromosome Location  IV: 3373631-3373752
Chromosome . Primary Identifier  IV Chromosome Location . Start  3373631
Chromosome Location . End  3373752
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0546.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40597 OTUB-4, isoform a 47.8 436 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00039182
WBRNAi00028201
WBRNAi00061977
WBRNAi00085080

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:B0546.2a 3373631 3373752 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015249 otub-4 B0546.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier 		Start End Strand
CDS:B0546.2a 3373631 3373752 -1
CDS:B0546.2a 3374435 3374785 -1
CDS:B0546.2a 3375339 3375500 -1
CDS:B0546.2a 3376172 3376484 -1
CDS:B0546.2a 3376988 3377160 -1
CDS:B0546.2a 3377868 3377986 -1
CDS:B0546.2a 3378034 3378104 -1

1 Sequence

Length
1311

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0546.2a.1 B0546.2a.1 1581   IV: 3373387-3378130