WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38C1BA.2a Sequence Name  Y38C1BA.2a
Length (nt)  1206   Chromosome Location  IV: 1805173-1805390
Chromosome . Primary Identifier  IV Chromosome Location . Start  1805173
Chromosome Location . End  1805390
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1BA.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28520 SNN-1, isoform a 44.5 401 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00056002
WBRNAi00020262
WBRNAi00020263
WBRNAi00020265
WBRNAi00020484
WBRNAi00020486
WBRNAi00036834
WBRNAi00060671
WBRNAi00060672
WBRNAi00060673
WBRNAi00060674
WBRNAi00060675
WBRNAi00060676
WBRNAi00060677
WBRNAi00060678
WBRNAi00060679

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y38C1BA.2a 1805173 1805390 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004913 snn-1 Y38C1BA.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y38C1BA.2a 1805173 1805390 -1
CDS:Y38C1BA.2a 1805464 1805622 -1
CDS:Y38C1BA.2a 1806231 1806501 -1
CDS:Y38C1BA.2a 1806652 1806795 -1
CDS:Y38C1BA.2a 1808080 1808493 -1

1 Sequence

Length
1206

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38C1BA.2a.4 Y38C1BA.2a.4 1897   IV: 1805027-1809038
Transcript:Y38C1BA.2a.1 Y38C1BA.2a.1 1593   IV: 1805027-1815118
Transcript:Y38C1BA.2a.3 Y38C1BA.2a.3 1516   IV: 1805032-1811254
Transcript:Y38C1BA.2a.2 Y38C1BA.2a.2 1444   IV: 1805032-1813944