WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1BA.2a.1 Sequence Name  Y38C1BA.2a.1
Length (nt)  1593   Chromosome Location  IV: 1805027-1815118
Chromosome . Primary Identifier  IV Chromosome Location . Start  1805027
Chromosome Location . End  1815118 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1BA.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004913 snn-1 Y38C1BA.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1BA.2a Y38C1BA.2a 1206   IV: 1805173-1805390

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1BA.2a.1 1805027 1815118 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114101   364   IV: 1805027-1805390 Caenorhabditis elegans
Exon114106   159   IV: 1805464-1805622 Caenorhabditis elegans
Exon114111   271   IV: 1806231-1806501 Caenorhabditis elegans
Exon114116   144   IV: 1806652-1806795 Caenorhabditis elegans
Exon114121   433   IV: 1808080-1808512 Caenorhabditis elegans
Exon114127   72   IV: 1813867-1813938 Caenorhabditis elegans
Exon114131   150   IV: 1814969-1815118 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1BA.2a.1 1805027 1815118 -1

1 Sequence

Length
1593

1 Sequence Ontology Term

Identifier Name Description
transcript