WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38C1AA.3b Sequence Name  Y38C1AA.3b
Length (nt)  948   Chromosome Location  IV: 189486-189629
Chromosome . Primary Identifier  IV Chromosome Location . Start  189486
Chromosome Location . End  189629
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41520 PNC-1, isoform b 35.4 315 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00055984

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y38C1AA.3b 189486 189629 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021395 pnc-1 Y38C1AA.3 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y38C1AA.3b 189486 189629 1
CDS:Y38C1AA.3b 190642 191250 1
CDS:Y38C1AA.3b 191885 192079 1

1 Sequence

Length
948

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38C1AA.3b.2 Y38C1AA.3b.2 1191   IV: 186254-192144
Transcript:Y38C1AA.3b.1 Y38C1AA.3b.1 1012   IV: 189486-192143