WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AA.3b.2 Sequence Name  Y38C1AA.3b.2
Length (nt)  1191   Chromosome Location  IV: 186254-192144
Chromosome . Primary Identifier  IV Chromosome Location . Start  186254
Chromosome Location . End  192144 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.3b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021395 pnc-1 Y38C1AA.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AA.3b Y38C1AA.3b 948   IV: 189486-189629

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.3b.2 186254 192144 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110625   178   IV: 186254-186431 Caenorhabditis elegans
Exon110628   144   IV: 189486-189629 Caenorhabditis elegans
Exon110632   609   IV: 190642-191250 Caenorhabditis elegans
Exon110634   260   IV: 191885-192144 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.3b.2 186254 192144 1

1 Sequence

Length
1191

1 Sequence Ontology Term

Identifier Name Description
transcript