WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39E4A.3a Sequence Name  Y39E4A.3a
Length (nt)  1296   Chromosome Location  III: 12968222-12968675
Chromosome . Primary Identifier  III Chromosome Location . Start  12968222
Chromosome Location . End  12968675
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4A.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33866 BCKD-1A, isoform a 49.0 431 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00056233
WBRNAi00056485
WBRNAi00020403
WBRNAi00020540
WBRNAi00006218
WBRNAi00033296
WBRNAi00110672
WBRNAi00102834

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39E4A.3a 12968222 12968675 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012713 bckd-1A Y39E4A.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39E4A.3a 12968222 12968675 -1
CDS:Y39E4A.3a 12969608 12969938 -1
CDS:Y39E4A.3a 12971240 12971627 -1
CDS:Y39E4A.3a 12971698 12971820 -1

1 Sequence

Length
1296

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39E4A.3a.2 Y39E4A.3a.2 1620   III: 12967898-12971820
Transcript:Y39E4A.3a.1 Y39E4A.3a.1 1685   III: 12967937-12972498