WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4A.3a.1 Sequence Name  Y39E4A.3a.1
Length (nt)  1685   Chromosome Location  III: 12967937-12972498
Chromosome . Primary Identifier  III Chromosome Location . Start  12967937
Chromosome Location . End  12972498 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4A.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012713 bckd-1A Y39E4A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4A.3a Y39E4A.3a 1296   III: 12968222-12968675

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4A.3a.1 12967937 12972498 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108279   739   III: 12967937-12968675 Caenorhabditis elegans
Exon108281   331   III: 12969608-12969938 Caenorhabditis elegans
Exon108284   388   III: 12971240-12971627 Caenorhabditis elegans
Exon108287   123   III: 12971698-12971820 Caenorhabditis elegans
Exon108291   104   III: 12972395-12972498 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4A.3a.1 12967937 12972498 -1

1 Sequence

Length
1685

1 Sequence Ontology Term

Identifier Name Description
transcript