WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C38C10.5a Sequence Name  C38C10.5a
Length (nt)  4149   Chromosome Location  III: 9394104-9394247
Chromosome . Primary Identifier  III Chromosome Location . Start  9394104
Chromosome Location . End  9394247
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C10.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44376 RGR-1, isoform a 156.2 1382 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00082419
WBRNAi00042135
WBRNAi00042136
WBRNAi00082691
WBRNAi00087238
WBRNAi00078433
WBRNAi00007945
WBRNAi00002586
WBRNAi00002809
WBRNAi00117639

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C38C10.5a 9394104 9394247 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004343 rgr-1 C38C10.5 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C38C10.5a 9394104 9394247 1
CDS:C38C10.5a 9394299 9395379 1
CDS:C38C10.5a 9395477 9396077 1
CDS:C38C10.5a 9396525 9396699 1
CDS:C38C10.5a 9397860 9398018 1
CDS:C38C10.5a 9398228 9398781 1
CDS:C38C10.5a 9399075 9399283 1
CDS:C38C10.5a 9399369 9399650 1
CDS:C38C10.5a 9400117 9400181 1
CDS:C38C10.5a 9400225 9400335 1
CDS:C38C10.5a 9403081 9403200 1
CDS:C38C10.5a 9403257 9403324 1
CDS:C38C10.5a 9403734 9404089 1
CDS:C38C10.5a 9404136 9404359 1

1 Sequence

Length
4149

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C38C10.5a.1 C38C10.5a.1 4657   III: 9393730-9404541