WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25B5.2a Sequence Name  F25B5.2a
Length (nt)  2274   Chromosome Location  III: 5959308-5959343
Chromosome . Primary Identifier  III Chromosome Location . Start  5959308
Chromosome Location . End  5959343
Paste the following link
Quick Links:
SummaryProteinsOther
 
Quick Links:
SummaryProteinsOther
 
Lists
This CDS isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B5.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01919 NOP-1, isoform a 83.4 757 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00000739
WBRNAi00045474
WBRNAi00031354
WBRNAi00013852
WBRNAi00005634
WBRNAi00062215
WBRNAi00112041

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F25B5.2a 5959308 5959343 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017774 nop-1 F25B5.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F25B5.2a 5959308 5959343 1
CDS:F25B5.2a 5959392 5959451 1
CDS:F25B5.2a 5959500 5959856 1
CDS:F25B5.2a 5959904 5960245 1
CDS:F25B5.2a 5960303 5960476 1
CDS:F25B5.2a 5960531 5961035 1
CDS:F25B5.2a 5961085 5961215 1
CDS:F25B5.2a 5961265 5961352 1
CDS:F25B5.2a 5961409 5961594 1
CDS:F25B5.2a 5961642 5962036 1

1 Sequence

Length
2274

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25B5.2a.1 F25B5.2a.1 2671   III: 5958779-5962325
Transcript:F25B5.2a.2 F25B5.2a.2 2607   III: 5959264-5962325