WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25B5.2a.2 Sequence Name  F25B5.2a.2
Length (nt)  2607   Chromosome Location  III: 5959264-5962325
Chromosome . Primary Identifier  III Chromosome Location . Start  5959264
Chromosome Location . End  5962325 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B5.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017774 nop-1 F25B5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B5.2a F25B5.2a 2274   III: 5959308-5959343

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25B5.2a.2 5959264 5962325 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90630   80   III: 5959264-5959343 Caenorhabditis elegans
Exon90634   60   III: 5959392-5959451 Caenorhabditis elegans
Exon90638   357   III: 5959500-5959856 Caenorhabditis elegans
Exon90642   342   III: 5959904-5960245 Caenorhabditis elegans
Exon90646   174   III: 5960303-5960476 Caenorhabditis elegans
Exon90652   505   III: 5960531-5961035 Caenorhabditis elegans
Exon90654   131   III: 5961085-5961215 Caenorhabditis elegans
Exon90658   88   III: 5961265-5961352 Caenorhabditis elegans
Exon90662   186   III: 5961409-5961594 Caenorhabditis elegans
Exon90668   684   III: 5961642-5962325 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25B5.2a.2 5959264 5962325 1

1 Sequence

Length
2607

1 Sequence Ontology Term

Identifier Name Description
transcript