WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25F2.2.1 Sequence Name  F25F2.2.1
Length (nt)  13422   Chromosome Location  III: 4520357-4536994
Chromosome . Primary Identifier  III Chromosome Location . Start  4520357
Chromosome Location . End  4536994 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25F2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000396 cdh-4 F25F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25F2.2 F25F2.2 12987   III: 4520459-4520695

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25F2.2.1 4520357 4536994 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86069   339   III: 4520357-4520695 Caenorhabditis elegans
Exon86070   264   III: 4521013-4521276 Caenorhabditis elegans
Exon86071   252   III: 4521613-4521864 Caenorhabditis elegans
Exon86072   231   III: 4521922-4522152 Caenorhabditis elegans
Exon86073   777   III: 4522256-4523032 Caenorhabditis elegans
Exon86074   114   III: 4523328-4523441 Caenorhabditis elegans
Exon86075   186   III: 4523829-4524014 Caenorhabditis elegans
Exon86076   105   III: 4524060-4524164 Caenorhabditis elegans
Exon86079   805   III: 4525310-4526114 Caenorhabditis elegans
Exon86080   553   III: 4526161-4526713 Caenorhabditis elegans
Exon86081   912   III: 4526763-4527674 Caenorhabditis elegans
Exon86082   828   III: 4527729-4528556 Caenorhabditis elegans
Exon86083   1876   III: 4528615-4530490 Caenorhabditis elegans
Exon86084   20   III: 4530492-4530511 Caenorhabditis elegans
Exon86085   69   III: 4530513-4530581 Caenorhabditis elegans
Exon86086   382   III: 4530643-4531024 Caenorhabditis elegans
Exon86087   1678   III: 4531072-4532749 Caenorhabditis elegans
Exon86088   2302   III: 4532822-4535123 Caenorhabditis elegans
Exon86089   267   III: 4535171-4535437 Caenorhabditis elegans
Exon86090   840   III: 4535486-4536325 Caenorhabditis elegans
Exon86091   622   III: 4536373-4536994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25F2.2.1 4520357 4536994 1

1 Sequence

Length
13422

1 Sequence Ontology Term

Identifier Name Description
transcript