WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A3CR.3a Sequence Name  Y39A3CR.3a
Length (nt)  2916   Chromosome Location  III: 1860438-1860618
Chromosome . Primary Identifier  III Chromosome Location . Start  1860438
Chromosome Location . End  1860618
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CR.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46276 TTC-7, isoform a 107.3 971 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056152
WBRNAi00020361
WBRNAi00020366

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y39A3CR.3a 1860438 1860618 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021444 ttc-7 Y39A3CR.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y39A3CR.3a 1860438 1860618 1
CDS:Y39A3CR.3a 1861670 1861827 1
CDS:Y39A3CR.3a 1864032 1864131 1
CDS:Y39A3CR.3a 1864312 1864563 1
CDS:Y39A3CR.3a 1865732 1865987 1
CDS:Y39A3CR.3a 1867288 1867474 1
CDS:Y39A3CR.3a 1870253 1870338 1
CDS:Y39A3CR.3a 1870393 1870709 1
CDS:Y39A3CR.3a 1871710 1871809 1
CDS:Y39A3CR.3a 1871919 1872277 1
CDS:Y39A3CR.3a 1873718 1874029 1
CDS:Y39A3CR.3a 1874526 1874761 1
CDS:Y39A3CR.3a 1875983 1876170 1
CDS:Y39A3CR.3a 1876817 1877000 1

1 Sequence

Length
2916

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A3CR.3a.1 Y39A3CR.3a.1 3810   III: 1860429-1877885