WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CR.3a.1 Sequence Name  Y39A3CR.3a.1
Length (nt)  3810   Chromosome Location  III: 1860429-1877885
Chromosome . Primary Identifier  III Chromosome Location . Start  1860429
Chromosome Location . End  1877885 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CR.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021444 ttc-7 Y39A3CR.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CR.3a Y39A3CR.3a 2916   III: 1860438-1860618

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A3CR.3a.1 1860429 1877885 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80324   190   III: 1860429-1860618 Caenorhabditis elegans
Exon80325   158   III: 1861670-1861827 Caenorhabditis elegans
Exon80327   100   III: 1864032-1864131 Caenorhabditis elegans
Exon80328   252   III: 1864312-1864563 Caenorhabditis elegans
Exon80329   256   III: 1865732-1865987 Caenorhabditis elegans
Exon80330   187   III: 1867288-1867474 Caenorhabditis elegans
Exon80333   86   III: 1870253-1870338 Caenorhabditis elegans
Exon80335   317   III: 1870393-1870709 Caenorhabditis elegans
Exon80337   100   III: 1871710-1871809 Caenorhabditis elegans
Exon80339   359   III: 1871919-1872277 Caenorhabditis elegans
Exon80341   312   III: 1873718-1874029 Caenorhabditis elegans
Exon80343   236   III: 1874526-1874761 Caenorhabditis elegans
Exon80345   188   III: 1875983-1876170 Caenorhabditis elegans
Exon80348   1069   III: 1876817-1877885 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A3CR.3a.1 1860429 1877885 1

1 Sequence

Length
3810

1 Sequence Ontology Term

Identifier Name Description
transcript