WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A3CL.5a Sequence Name  Y39A3CL.5a
Length (nt)  2151   Chromosome Location  III: 1807891-1807900
Chromosome . Primary Identifier  III Chromosome Location . Start  1807891
Chromosome Location . End  1807900
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CL.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33219 CLP-4, isoform a 80.2 716 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00056148
WBRNAi00020369
WBRNAi00007078
WBRNAi00022739
WBRNAi00022740
WBRNAi00022741
WBRNAi00036902
WBRNAi00091826
WBRNAi00091831
WBRNAi00091836
WBRNAi00091801
WBRNAi00091806
WBRNAi00091811
WBRNAi00091816
WBRNAi00091821

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A3CL.5a 1807891 1807900 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000545 clp-4 Y39A3CL.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A3CL.5a 1807891 1807900 -1
CDS:Y39A3CL.5a 1807955 1808374 -1
CDS:Y39A3CL.5a 1809118 1809392 -1
CDS:Y39A3CL.5a 1809690 1809833 -1
CDS:Y39A3CL.5a 1811052 1811374 -1
CDS:Y39A3CL.5a 1812755 1813102 -1
CDS:Y39A3CL.5a 1814397 1814846 -1
CDS:Y39A3CL.5a 1815443 1815568 -1
CDS:Y39A3CL.5a 1818265 1818319 -1

1 Sequence

Length
2151

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A3CL.5a.1 Y39A3CL.5a.1 2306   III: 1807740-1818323