WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28C6.4a Sequence Name  F28C6.4a
Length (nt)  2238   Chromosome Location  II: 8596300-8596483
Chromosome . Primary Identifier  II Chromosome Location . Start  8596300
Chromosome Location . End  8596483
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28C6.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35863 PIGG-1, isoform a 84.3 745 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001510
WBRNAi00045817
WBRNAi00014042
WBRNAi00076356
WBRNAi00031519
WBRNAi00111237

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F28C6.4a 8596300 8596483 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009204 pigg-1 F28C6.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F28C6.4a 8596300 8596483 -1
CDS:F28C6.4a 8596536 8596669 -1
CDS:F28C6.4a 8596712 8596934 -1
CDS:F28C6.4a 8597118 8597240 -1
CDS:F28C6.4a 8597288 8597445 -1
CDS:F28C6.4a 8597492 8597680 -1
CDS:F28C6.4a 8597732 8597901 -1
CDS:F28C6.4a 8597950 8598864 -1
CDS:F28C6.4a 8599030 8599144 -1
CDS:F28C6.4a 8599196 8599222 -1

1 Sequence

Length
2238

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28C6.4a.1 F28C6.4a.1 2693   II: 8596275-8600265
Transcript:F28C6.4a.3 F28C6.4a.3 2349   II: 8596275-8599308
Transcript:F28C6.4a.2 F28C6.4a.2 2350   II: 8596283-8599317