WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28C6.4a.1 Sequence Name  F28C6.4a.1
Length (nt)  2693   Chromosome Location  II: 8596275-8600265
Chromosome . Primary Identifier  II Chromosome Location . Start  8596275
Chromosome Location . End  8600265 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28C6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009204 pigg-1 F28C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28C6.4a F28C6.4a 2238   II: 8596300-8596483

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28C6.4a.1 8596275 8600265 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60886   209   II: 8596275-8596483 Caenorhabditis elegans
Exon60891   134   II: 8596536-8596669 Caenorhabditis elegans
Exon60894   223   II: 8596712-8596934 Caenorhabditis elegans
Exon60898   123   II: 8597118-8597240 Caenorhabditis elegans
Exon60902   158   II: 8597288-8597445 Caenorhabditis elegans
Exon60906   189   II: 8597492-8597680 Caenorhabditis elegans
Exon60910   170   II: 8597732-8597901 Caenorhabditis elegans
Exon60914   915   II: 8597950-8598864 Caenorhabditis elegans
Exon60918   115   II: 8599030-8599144 Caenorhabditis elegans
Exon60923   122   II: 8599196-8599317 Caenorhabditis elegans
Exon60928   335   II: 8599931-8600265 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28C6.4a.1 8596275 8600265 -1

1 Sequence

Length
2693

1 Sequence Ontology Term

Identifier Name Description
transcript