WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F09E5.5 Sequence Name  F09E5.5
Length (nt)  2391   Chromosome Location  II: 5359561-5359671
Chromosome . Primary Identifier  II Chromosome Location . Start  5359561
Chromosome Location . End  5359671
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E5.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29752 SEC-6 90.6 796 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00044130
WBRNAi00025045
WBRNAi00027263
WBRNAi00115653
WBRNAi00012979
WBRNAi00071692
WBRNAi00081459
WBRNAi00090889
WBRNAi00081467
WBRNAi00071137
WBRNAi00115654
WBRNAi00110587

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F09E5.5 5359561 5359671 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017284 sec-6 F09E5.5 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F09E5.5 5359561 5359671 1
CDS:F09E5.5 5359729 5359841 1
CDS:F09E5.5 5359889 5360183 1
CDS:F09E5.5 5360237 5360332 1
CDS:F09E5.5 5360680 5360747 1
CDS:F09E5.5 5361071 5361377 1
CDS:F09E5.5 5361429 5361674 1
CDS:F09E5.5 5362216 5362308 1
CDS:F09E5.5 5369133 5369226 1
CDS:F09E5.5 5369277 5369347 1
CDS:F09E5.5 5369811 5370019 1
CDS:F09E5.5 5371185 5371409 1
CDS:F09E5.5 5371461 5371581 1
CDS:F09E5.5 5371632 5371973 1

1 Sequence

Length
2391

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F09E5.5.1 F09E5.5.1 2609   II: 5359552-5372182
Transcript:F09E5.5.2 F09E5.5.2 2601   II: 5359560-5372182