WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E5.5.1 Sequence Name  F09E5.5.1
Length (nt)  2609   Chromosome Location  II: 5359552-5372182
Chromosome . Primary Identifier  II Chromosome Location . Start  5359552
Chromosome Location . End  5372182 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017284 sec-6 F09E5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E5.5 F09E5.5 2391   II: 5359561-5359671

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.5.1 5359552 5372182 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49983   120   II: 5359552-5359671 Caenorhabditis elegans
Exon49985   113   II: 5359729-5359841 Caenorhabditis elegans
Exon49987   295   II: 5359889-5360183 Caenorhabditis elegans
Exon49989   96   II: 5360237-5360332 Caenorhabditis elegans
Exon49991   68   II: 5360680-5360747 Caenorhabditis elegans
Exon49993   307   II: 5361071-5361377 Caenorhabditis elegans
Exon49995   246   II: 5361429-5361674 Caenorhabditis elegans
Exon49997   93   II: 5362216-5362308 Caenorhabditis elegans
Exon50013   94   II: 5369133-5369226 Caenorhabditis elegans
Exon50015   71   II: 5369277-5369347 Caenorhabditis elegans
Exon50017   209   II: 5369811-5370019 Caenorhabditis elegans
Exon50020   225   II: 5371185-5371409 Caenorhabditis elegans
Exon50022   121   II: 5371461-5371581 Caenorhabditis elegans
Exon50024   551   II: 5371632-5372182 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.5.1 5359552 5372182 1

1 Sequence

Length
2609

1 Sequence Ontology Term

Identifier Name Description
transcript