WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T12C9.5a Sequence Name  T12C9.5a
Length (nt)  915   Chromosome Location  II: 4433864-4434220
Chromosome . Primary Identifier  II Chromosome Location . Start  4433864
Chromosome Location . End  4434220
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12C9.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33450 NHR-109, isoform a 35.5 304 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00053197
WBRNAi00084678

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:T12C9.5a 4433864 4434220 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003699 nhr-109 T12C9.5 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier 		Start End Strand
CDS:T12C9.5a 4433864 4434220 1
CDS:T12C9.5a 4434539 4434723 1
CDS:T12C9.5a 4434775 4435147 1

1 Sequence

Length
915

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T12C9.5a.3 T12C9.5a.3 1437   II: 4433367-4435172
Transcript:T12C9.5a.1 T12C9.5a.1 1136   II: 4433393-4435169
Transcript:T12C9.5a.4 T12C9.5a.4 1359   II: 4433393-4435352
Transcript:T12C9.5a.2 T12C9.5a.2 1359   II: 4433402-4435169
Transcript:T12C9.5a.5 T12C9.5a.5 1002   II: 4433441-4435169